Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015847360.1_cds_XP_016510035.1_22919
CDS Infomation

[gene=LOC107827414] [db_xref=GeneID:107827414] [protein=glycerophosphodiester phosphodiesterase GDPDL4-like] [partial=3'] [protein_id=XP_016510035.1] [location=join(20146..20293,21555..21848,22857..22972,23179..23680,24393..24431,25007..>25291)] [gbkey=CDS]
Sequence

ATGCGACAGTACTTCCTCCGGCTATCGTTGCCGGCGGCAATGTGGAATCTCCGGTCTCTC
TCATGCTTATTGTTGCTCTGCTTTTCGGTCACGACAGTTGCTGCTCAAAGAACTAACAGT
GAAACTACTAAATGGCTAACATTAAACGGAGATGCACCATTAGTTATAGCCCTTGGTGGA
TTTTCTGGATTATTTCCTGATTCAAGCTATGATGCCTATATGGTGGCAATGGAAACTAGC
TTGGCCAATGTGATTGCTTGGTGTGATGTCCAACTAACCAAAGATGGGGTCGGCATCTGC
TTACCTGATCTCAAGCTTGACAATGCTTCTGACATTGATGTGTACTTCAAAAACAAGGAG
ACTAAATACTCAGTGAATGGAGTTCCAATGCAAGGATGGTTTTCTATAGATTTCAACTTC
AAGGATTTGGCGCCTGTCACCTTGAGACAAGGAGTTTTTTCGCGGACCCCTAAATTTGAT
GGCACACAGCAGAAAATTCTTACTGTCCTGGATGTGGTTAACAAAGTCAAACCTCCAGGA
TTATGGTTGAATATCCAGCATGACACTTTCTTCAGCCAGCACAATCTGAGTATGAGAAGC
TTTATTATATCCCTGTCCAGAAGTGTTATTGTCAACTATATTTCATCACCTGAGGTGAAT
TTCCTCAAAAGTATTGTGTCACGATTCAATCCACTAGTTACAAAACTCGTTTTCCGGTTT
CTCGGACAGGGTGACATTGAGCCTTCAACAAATCAAACATATGGTTCTTTATTGAAGAAT
CTCACATTTATCAAAACCTTTGCCTCTGGAATTCTTGTTCCCAAGACTTATATCTGGCCG
GTGGACAACTCACTGTACTTACAGCCACATACATCACTTGTCTTAGATGCTCATAAAGAA
GGTCTTCAGATTTTTGCATCGGAGTTCGTAAATGATGTACCTTTTGCTTACAATTACAGC
TATGATCCTGCAACTGAGTATTTGTCCTTTATTGACAATGGAGACTTTTCTGTGGATGGA
GTACTGTCTGACTTCCCAATAACTCCATCAGCTACAATAGATTGCTTCACTCATTTGGGC
AAGAATGATAAACCTCAAGCAAAGCTTCTGATTATCACATCTGAAGGAGCGAGTGGAGAC
TACCCAGGTTGTACTGATTTGGCATATACAAAAGCTGCTATGGATGGTGCAGATGTTCTT
GACTGTCCTGTCCAAATGTCAAAGGATGGAATACCCTTTTGCCTGGGTTCTATTAATTTG
ATAGATAAGACTACAGTTGCTCAATCGCCATTCGGCAATATTGGTAGTGCTGTCCCAGAG
CTTAACGTAACAAATGGAATATTCACCTTTAACCTTACCTGGGATGAGATTAAGAGCCTG
AAAC

Peptide Sequence

PEP ID

XP_016510035.1
PEP Infomation

PREDICTED: glycerophosphodiester phosphodiesterase GDPDL4-like, partial [Nicotiana tabacum]
Sequence

MRQYFLRLSLPAAMWNLRSLSCLLLLCFSVTTVAAQRTNSETTKWLTLNGDAPLVIALGG
FSGLFPDSSYDAYMVAMETSLANVIAWCDVQLTKDGVGICLPDLKLDNASDIDVYFKNKE
TKYSVNGVPMQGWFSIDFNFKDLAPVTLRQGVFSRTPKFDGTQQKILTVLDVVNKVKPPG
LWLNIQHDTFFSQHNLSMRSFIISLSRSVIVNYISSPEVNFLKSIVSRFNPLVTKLVFRF
LGQGDIEPSTNQTYGSLLKNLTFIKTFASGILVPKTYIWPVDNSLYLQPHTSLVLDAHKE
GLQIFASEFVNDVPFAYNYSYDPATEYLSFIDNGDFSVDGVLSDFPITPSATIDCFTHLG
KNDKPQAKLLIITSEGASGDYPGCTDLAYTKAAMDGADVLDCPVQMSKDGIPFCLGSINL
IDKTTVAQSPFGNIGSAVPELNVTNGIFTFNLTWDEIKSLK

Transcript Sequence

Gene sequence data has not been registered.